Table 5.
Annotation results of 22 SNPs associated with Mortality
Reference ID | SSC | NCBI Assay ID | Porcine gene name | Position | SNP code |
rs45431209 | 7 | ss23129507 | KIAA0082 | 577,640 | A/G |
rs45431691 | 13 | ss23130589 | RASA2 | 67,128,049 | A/C |
rs45431421 | 12 | ss23131519 | MYH3 | 52,423,895 | A/C |
rs45435111 | 1 | ss23132309 | GSN | unknown | A/G |
rs45432261 | 12 | ss23131659 | FLJ20920 | 26,828,978 | C/T |
rs45433249 | 13 | ss23131847 | CXADR | 131,088,764 | A/G |
rs10720198 | 16 | ss16337513 | DUSP1 | 48,837,371 | A/G |
rs45432566 | 6 | ss23132764 | WDR8 | 40,100,516 | C/T |
rs45432608 | 6 | ss23132806 | CNKSR1 | 77,206,489 | C/T |
rs45434874 | 15 | ss23130072 | NGEF | 125,768,114 | C/T |
rs45435155 | 6 | ss23130153 | SESN2 | 61,933,658 | C/T |
rs45432669 | 6 | ss23130767 | CNOT1 | 19,267,073 | A/T |
rs45431071 | 10 | ss23130469 | EPRS | 9,592,654 | C/T |
rs10720745 | 17 | ss16338095 | BMP2 | 191,959,283 | A/T |
rs45433249 | 13 | ss23131847 | CXADR | 131,088,505 | C/T |
rs45431058 | 9 | ss23130456 | NCAPD3 | unknown | A/G |
rs45435080 | 14 | ss23132278 | EWSR1 | 46,990,752 | C/G |
rs45431421 | 12 | ss23131519 | MYH3 | 52,423,983 | C/G |
rs45430738 | 7 | ss23130336 | DSP | 4,931,933 | A/G |
rs10720341 | 13 | ss16337664 | RRP9 | 37,265,891 | C/T |
rs45431031 | 14 | ss23130429 | PES1 | 48,294,710 | C/T |
rs45432756 | 9 | ss23131757 | CTLA4 | 100,707,423 | A/G |